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    lrrc75a leucine rich repeat containing 75A [ Danio rerio (zebrafish) ]

    Gene ID: 562936, updated on 27-Mar-2024

    Summary

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    Official Symbol
    lrrc75aprovided by ZNC
    Official Full Name
    leucine rich repeat containing 75Aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-131127-289
    See related
    Ensembl:ENSDARG00000076834 AllianceGenome:ZFIN:ZDB-GENE-131127-289
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:dkey-151p21.7
    Summary
    Orthologous to human LRRC75A (leucine rich repeat containing 75A). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 15
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (24690802..24736875)
    105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (24755937..24801610)

    Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 199 Neighboring gene polymerase (DNA-directed), delta interacting protein 2 Neighboring gene v-crk avian sarcoma virus CT10 oncogene homolog Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    leucine-rich repeat-containing protein 75A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007126.7 Reference GRCz11 Primary Assembly

      Range
      24690802..24736875
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_686301.5 → XP_691393.2  leucine-rich repeat-containing protein 75A

      UniProtKB/TrEMBL
      A0A8N7UUY9, E7F2Y2
      Related
      ENSDARP00000100990.2, ENSDART00000110618.4
      Conserved Domains (1) summary
      cl26161
      Location:170 → 259
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394947.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      450040..496113
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021472945.1 → XP_021328620.1  leucine-rich repeat-containing protein 75A

      UniProtKB/TrEMBL
      A0A8N7UUY9, E7F2Y2
      Conserved Domains (1) summary
      cl26161
      Location:170 → 259
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395323.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      41831..87904
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021474345.1 → XP_021330020.1  leucine-rich repeat-containing protein 75A

      UniProtKB/TrEMBL
      A0A8N7UUY9, E7F2Y2
      Conserved Domains (1) summary
      cl26161
      Location:170 → 259
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    Nucleotide Protein Strain
    Heading Accession and Version

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